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Dr Cristina Sisu
Senior Lecturer in Genomic Data Analytics

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Kerslake, R., Sisu, C., Panfilov, S., Hall, M., Khan, N., Jeyaneethi, J., et al. (2022) 'Differential Regulation of Genes by the Glucogenic Hormone Asprosin in Ovarian Cancer'. Journal of Clinical Medicine, 11 (19). pp. 1 - 18. ISSN: 2077-0383 Open Access Link

Journal article

Ragusa, D., Cicirò, Y., Federico, C., Saccone, S., Bruno, F., Saeedi, R., et al. (2022) 'Engineered model of t(7;12)(q36;p13) AML recapitulates patient-specific features and gene expression profiles'. Oncogenesis, 11 (1). pp. 1 - 7. ISSN: 2157-9024 Open Access Link

Journal article

Zahra, A., Kerslake, R., Kyrou, I., Randeva, H., Sisu, C. and Karteris, E. (2022) 'Impact of environmentally relevant concentrations of Bisphenol A (BPA) on the gene expression profile in an in vitro model of the normal human ovary'. International Journal of Molecular Sciences, 23 (10). pp. 1 - 14. ISSN: 1661-6596 Open Access Link

Journal article

Sisu, C. (2021) 'Pseudogenes as Biomarkers and Therapeutic Targets in Human Cancers', in Poliseno, L. (ed.) Methods in Molecular Biology. New York, NY, USA : Humana (Springer Nature). , 2324. pp. 319 - 337. ISBN 10: 1-0716-1503-3. ISBN 13: 978-1-0716-1502-7.

Book chapter

Sisu, C. (2021) 'GENCODE Pseudogenes', in Poliseno, L. (ed.) Methods in Molecular Biology. New York, NY, USA : Humana (Springer Nature). , 2324. pp. 67 - 82. ISBN 10: 1-0716-1503-3. ISBN 13: 978-1-0716-1502-7.

Book chapter

Zahra, A., Dong, Q., Hall, M., Jeyaneethi, J., Silva, E., Karteris, E. and et al. (2021) 'Identification of Potential Bisphenol A (BPA) Exposure Biomarkers in Ovarian Cancer'. Journal of Clinical Medicine, 10 (9). pp. 1 - 20. ISSN: 2077-0383 Open Access Link

Journal article

Frankish, A., Diekhans, M., Jungreis, I., Lagarde, J., Loveland, JE., Mudge, JM., et al. (2020) 'GENCODE 2021'. Nucleic acids research, 49 (D1). pp. D916 - D923. ISSN: 1362-4962 Open Access Link

Journal article

Katopodis, P., Dong, Q., Halai, H., Fratila, CI., Polychronis, A., Anikin, V., et al. (2020) 'In silico and in vitro analysis of lncRNA XIST reveals a panel of possible lung cancer regulators and a five-gene diagnostic signature'. Cancers, 12 (12). pp. 1 - 16. ISSN: 2072-6694 Open Access Link

Journal article

Sisu, C., Muir, P., Frankish, A., Fiddes, I., Diekhans, M., Thybert, D., et al. (2020) 'Transcriptional activity and strain-specific history of mouse pseudogenes'. Nature Communications, 11 (1). pp. 1 - 14. ISSN: 2041-1723 Open Access Link

Journal article

The ENCODE Project Consortium., Moore, JE., Weng, Z. and Sisu, C. (2020) 'Expanded encyclopaedias of DNA elements in the human and mouse genomes'. Nature, 583 (7818). pp. 699 - 710. ISSN: 0028-0836 Open Access Link

Journal article

The ENCODE Project Consortium., Snyder, MP., Gingeras, TR., Abascal, F., Acosta, R., Addleman, NJ., et al. (2020) 'Perspectives on ENCODE'. Nature, 583 (7818). pp. 693 - 698. ISSN: 0028-0836 Open Access Link

Journal article

Chudasama, D., Katopodis, P., Stone, N., Haskell, J., Sheridan, H., Gardner, B., et al. (2019) 'Liquid biopsies in lung cancer: Four emerging technologies and potential clinical applications'. Cancers, 11 (3). pp. 331 - 331. ISSN: 2072-6694 Open Access Link

Journal article

Rogers‑Broadway, K-R., Kumar, J., Sisu, C., Wander, G., Mazey, E., Jeyaneethi, J., et al. (2018) 'Differential expression of mTOR components in endometriosis and ovarian cancer: Effects of rapalogues and dual kinase inhibitors on mTORC1 and mTORC2 stoichiometry'. International Journal of Molecular Medicine, 43 (1). pp. 47 - 56. ISSN: 1107-3756 Open Access Link

Journal article

Frankish, A., Diekhans, M., Ferreira, AM., Johnson, R., Jungreis, I., Loveland, J., et al. (2018) 'GENCODE reference annotation for the human and mouse genomes'. Nucleic Acids Research, 47 (D1). pp. D766 - D773. ISSN: 0305-1048 Open Access Link

Journal article

Lilue, J., Doran, AG., Fiddes, IT., Abrudan, M., Armstrong, J., Bennett, R., et al. (2018) 'Sixteen diverse laboratory mouse reference genomes define strain specific haplotypes and novel functional loci'. Nature Genetics, 50 (11). pp. 1574 - 1583. ISSN: 1061-4036 Open Access Link

Journal article

Thybert, D., Roller, M., Navarro, FCP., Fiddes, I., Streeter, I., Feig, C., et al. (2018) 'Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes'. Genome Research, 28 (4). pp. 448 - 459. ISSN: 1088-9051 Open Access Link

Journal article

Altshuler, DM., Durbin, RM., Abecasis, GR., Bentley, DR., Chakravarti, A., Clark, AG., et al. (2015) 'A global reference for human genetic variation'. NATURE, 526 (7571). pp. 68. ISSN: 0028-0836 Open Access Link

Journal article

Wang, D., Yan, KK., Sisu, C., Cheng, C., Rozowsky, J., Meyerson, W. and et al. (2015) 'Loregic: A method to characterize the cooperative logic of regulatory factors'. PLoS Computational Biology, 11 (4). pp. e1004132 - e1004132. ISSN: 1553-734X Open Access Link

Journal article

Sisu, C., Pei, B., Leng, J., Frankish, A., Zhang, Y., Balasubramanian, S., et al. (2014) 'Comparative analysis of pseudogenes across three phyla'. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 111 (37). pp. 13361 - 13366. ISSN: 0027-8424 Open Access Link

Journal article

Gerstein, MB., Rozowsky, J., Yan, KK., Wang, D., Cheng, C., Brown, JB., et al. (2014) 'Comparative analysis of the transcriptome across distant species'. Nature, 512 (7515). pp. 445 - 448. ISSN: 0028-0836 Open Access Link

Journal article

Delaneau, O., Marchini, J., McVeanh, GA., Donnelly, P., Lunter, G., Marchini, JL., et al. (2014) 'Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel'. Nature Communications, 5 (1). pp. 3934. ISSN: 2041-1723 Open Access Link

Journal article

Khurana, E., Fu, Y., Colonna, V., Mu, XJ., Kang, HM., Lappalainen, T., et al. (2013) 'Integrative Annotation of Variants from 1092 Humans: Application to Cancer Genomics'. SCIENCE, 342 (6154). pp. 84. ISSN: 0036-8075 Open Access Link

Journal article

Altshuler, DM., Durbin, RM., Abecasis, GR., Bentley, DR., Chakravarti, A., Clark, AG., et al. (2012) 'An integrated map of genetic variation from 1,092 human genomes'. NATURE, 491 (7422). pp. 56 - 65. ISSN: 0028-0836 Open Access Link

Journal article

Dunham, I., Kundaje, A., Aldred, SF., Collins, PJ., Davis, C., Doyle, F., et al. (2012) 'An integrated encyclopedia of DNA elements in the human genome'. NATURE, 489 (7414). pp. 57 - 74. ISSN: 0028-0836 Open Access Link

Journal article

Pei, B., Sisu, C., Frankish, A., Howald, C., Habegger, L., Mu, XJ., et al. (2012) 'The GENCODE pseudogene resource'. GENOME BIOLOGY, 13 (9). pp. R51 - R51. ISSN: 1474-760X Open Access Link

Journal article

Sisu, C., Baron, AJ., Branderhorst, HM., Connell, SD., Weijers, CAGM., de Vries, R., et al. (2009) 'The influence of ligand valency on aggregation mechanisms for inhibiting bacterial toxins'. ChemBioChem, 10 (2). pp. 329 - 337. ISSN: 1439-4227

Journal article

Albrecht, B., Grant, GH., Sisu, C. and Richards, WG. (2008) 'Classification of proteins based on similarity of two-dimensional protein maps'. Biophysical Chemistry, 138 (1-2). pp. 11 - 22. ISSN: 0301-4622

Journal article

Pukin, AV., Branderhorst, HM., Sisu, C., Weijers, CAGM., Gilbert, M., Liskamp, RMJ., et al. (2007) 'Strong inhibition of cholera toxin by multivalent GM1 derivatives'. ChemBioChem, 8 (13). pp. 1500 - 1503. ISSN: 1439-4227

Journal article