Ndipenoch, N., Miron, A. and Li, Y. (2024) 'Performance Evaluation of Retinal OCT Fluid Segmentation, Detection and Generalisation over Variations of Data Sources'. IEEE Access, 12. pp. 31719 - 31735.Open Access Link

Islam, T., Miron, A., Liu, X. and Li, Y. (2024) 'Deep Learning in Virtual Try-On: A Comprehensive Survey'. IEEE Access, 12. pp. 29475 - 29502.Open Access Link

Ehab, W., Huang, L. and Li, Y. (2024) 'UNet and Variants for Medical Image Segmentation'. International Journal of Network Dynamics and Intelligence, 0 (accepted, in press).Open Access Link

McConnell, N., Ndipenoch, N., Cao, Y., Miron, A. and Li, Y. (2023) 'Exploring advanced architectural variations of nnUNet'. Neurocomputing, 560 (1 December 2023). pp. 1 - 15. ISSN: 0925-2312 Open Access Link

Ehab, W. and Li, Y. (Accepted) 'Performance Analysis of UNet and Variants for Medical Image Segmentation'. .

Shahi, K. and Li, Y. (2023) 'Background Replacement in Video Conferencing'. International Journal of Network Dynamics and Intelligence, 2 (2). pp. 1 - 11.Open Access Link

Shepperd, M. and Yousefi, L. (2023) 'An analysis of retracted papers in Computer Science'. PLoS One, 18 (5). pp. 1 - 17. ISSN: 1932-6203 Open Access Link

Omran, T., Sharef, B., Grosan, C. and Li, Y. (2023) 'Sentiment Analysis of Multilingual Dataset of Bahraini Dialects, Arabic, and English'. Data, 8 (4). pp. 1 - 13.Open Access Link

Anene, IL. and Li, Y. (Accepted) 'Segmentation of Retinal Blood Vessels Using Deep Learning'. .

Omran, T., Sharef, B., Grosan, C. and Li, Y. (2023) 'The Impact of Data Augmentation on Sentiment Analysis of Translated Textual Data'.International Conference on IT Innovations and Knowledge Discovery (ITIKD). Manama, Bahrain. 8 - 9 March. IEEE. pp. 1 - 4.Open Access Link

Nunez, D. and Li, Y. (2023) 'Skin Lesion Diagnosis Using Convolutional Neural Networks'. Journal of Medical Systems, 0 (accepted, in press). pp. 1 - 14. ISSN: 0148-5598 Open Access Link

Ndipenoch, N., Miron, A., Wang, Z. and Li, Y. (2023) 'Retinal Image Segmentation with Small Datasets'.BIOIMAGING 2023 : 10th International Conference on Bioimaging. Lisbon, Portugal. 16 - 18 February. SCITEPRESS - Science and Technology Publications. pp. 129 - 137. ISSN: 2184-349X Open Access Link

Omran, T. and Li, Y. (2022) 'Transfer Learning and Sentiment Analysis of Bahraini Dialects Sequential Text Data Using Multilingual Deep Learning Approach'. Data & Knowledge Engineering, 143. pp. 1 - 19. ISSN: 0169-023X

Ndipenoch, N., Miron, A., Wang, Z. and Li, Y. (2022) 'Simultaneous Segmentation of Layers and Fluids in Retinal OCT Images'.2022 15th International Congress on Image and Signal Processing, BioMedical Engineering and Informatics (CISP-BMEI). Beijing, China. 5 - 24 October. IEEE.Open Access Link

Shepperd, M., Abreu, FBE. and Perez-Castillo, R. (2022) 'Special issue on information systems quality management in practice'. Software Quality Journal, 30 (2). pp. 281 - 282. ISSN: 0963-9314

Gren, L. and Shepperd, M. (2022) 'Problem reports and team maturity in agile automotive software development'. Proceedings - 15th International Conference on Cooperative and Human Aspects of Software Engineering, CHASE 2022. pp. 41 - 45.

Omran, T. and Li, Y. (2022) 'Ensemble Learning for Sentiment Analysis of Translation-Based Textual Data'.IEEE International Conference on Electrical, Computer, Communications and Mechatronics Engineering. IEEE.

Islam, T., Miron, A., Liu, X. and Li, Y. (2022) 'SVTON: Simplified Virtual Try-On'.IEEE International Conference on Machine Learning and Applications. Paradise Island, Bahamas. 1 - 14 December. IEEE. pp. 369 - 374.Open Access Link

McConnell, N. and Li, Y. (2022) 'Integrating Residual, Dense, and Inception Blocks into the nnUNet'.CBMS 2022: IEEE 35th International Symposium on Computer Based Medical Systems. Online from Shenzhen, China. 1 - 23 July. IEEE. pp. 217 - 222. ISSN: 1063-7125 Open Access Link

Wang, K., Stevens, R., Alachram, H., Li, Y., Soldatova, L., King, R., Ananiadou, S., Schoene, AM., Li, M., Christopoulou, F., Ambite, JL., Matthew, J., Garg, S., Hermjakob, U., Marcu, D., Sheng, E., Beißbarth, T., Wingender, E., Galstyan, A., Gao, X., Chambers, B., Pan, W., Khomtchouk, BB., Evans, JA. and Rzhetsky, A. et al. (2021) 'NERO: a biomedical named-entity (recognition) ontology with a large, annotated corpus reveals meaningful associations through text embedding'. npj Systems Biology and Applications, 7 (1). pp. 38. ISSN: 2056-7189

Yao, J. and Shepperd, M. (2021) 'The impact of using biased performance metrics on software defect prediction research'. Information and Software Technology, 139. pp. 106664 - 106664. ISSN: 0950-5849

Den Besten, M., Amrit, C., Capiluppi, A. and Robles, G. (2021) 'Collaboration and innovation dynamics in software ecosystems: A technology management research perspective'. IEEE Transactions on Engineering Management, 68 (5). pp. 1532 - 1537. ISSN: 0018-9391

Kirbas, S., Windels, E., Mcbello, O., Kells, K., Pagano, M., Szalanski, R., Nowack, V., Winter, ER., Counsell, S., Bowes, D., Hall, T., Haraldsson, S. and Woodward, J. et al. (2021) 'On the Introduction of Automatic Program Repair in Bloomberg'. IEEE Software, 38 (4). pp. 43 - 51. ISSN: 0740-7459

Sas, C. and Capiluppi, A. (2021) 'Using Structural and Semantic Information to Identify Software Components'.2021 IEEE International Conference on Software Analysis, Evolution and Reengineering (SANER). IEEE. pp. 546 - 550.

Wang, C. and Li, Y. (2020) 'Blood Vessel Segmentation from Retinal Images'.2020 IEEE 20th International Conference on Bioinformatics and Bioengineering (BIBE). Cincinnati, OH, USA (Virtual). 26 - 28 October. IEEE. pp. 759 - 766. ISSN: 2159-5410

Margoni, F. and Shepperd, M. (2020) 'Changing the logic of replication: A case from infant studies'. Infant Behavior and Development, 61. pp. 101483 - 101483. ISSN: 0163-6383 Open Access Link

Ajienka, N., Vangorp, P. and Capiluppi, A. (2020) 'An empirical analysis of source code metrics and smart contract resource consumption'. Journal of Software: Evolution and Process, 32 (10). ISSN: 2047-7473

Capiluppi, A. and Ajienka, N. (2020) 'Towards A Dependency-Driven Taxonomy of Software Types'.ICSE '20: 42nd International Conference on Software Engineering. ACM. pp. 687 - 694.

Capiluppi, A., Ajienka, N. and Counsell, S. (2020) 'The effect of multiple developers on structural attributes: A Study based on java software'. Journal of Systems and Software, 167 (September 2020). pp. 1 - 19. ISSN: 0164-1212 Open Access Link

Capiluppi, A., Ajienka, N., Ali, N., Arzoky, M., Counsell, S., Destefanis, G., Miron, A., Nagaria, B., Neykova, R., Shepperd, M., Swift, S. and Tucker, A. et al. (2020) 'Using the Lexicon from Source Code to Determine Application Domains'.International Conference on Evaluation and Assessment in Software Engineering. Trondheim, Norway. 17 - 17 April. ACM. pp. 110 - 119.Open Access Link

Yao, J. and Shepperd, M. (2020) 'Assessing Software Defection Prediction Performance: Why Using the Matthews Correlation Coefficient Matters'.24th ACM International Conference on Evaluation and Assessment in Software Engineering (EASE). Trondheim. 15 - 17 April. ACM. pp. 120 - 129.Open Access Link

Walkinshaw, N. and Shepperd, M. (2020) 'Reasoning about uncertainty in empirical results'.24th ACM, International Conference on Evaluation and Assessment in Software Engineering (EASE),. Trondheim. 15 - 17 April. ACM. pp. 140 - 149.Open Access Link

Roth, T., Weier, M., Bauszat, P., Hinkenjann, A. and Li, Y. (2020) 'Hash-based hierarchical caching and layered filtering for interactive previews in global illumination rendering'. Computers, 9 (1). pp. 1 - 25. ISSN: 2073-431X Open Access Link

Li, N., Shepperd, M. and Guo, Y. (2020) 'A systematic review of unsupervised learning techniques for software defect prediction'. Information and Software Technology, 122 (June 2020). pp. 1 - 15. ISSN: 0950-5849 Open Access Link

Capiluppi, A., Di Ruscio, D., Di Rocco, J., Nguyen, PT. and Ajienka, N. (2020) 'Detecting Java Software Similarities by using Different Clustering Techniques'. Information and Software Technology, 122. pp. 1 - 18. ISSN: 0950-5849 Open Access Link

Capiluppi, A. and Ajienka, N. (2020) 'Lexical content as a cooperation aide: a study based on Java software'. Journal of Systems and Software, 164. pp. 110543 - 110543. ISSN: 0164-1212 Open Access Link

Pauzi, Z. and Capiluppi, A. (2020) 'Text Similarity Between Concepts Extracted from Source Code and Documentation'. Springer International Publishing. pp. 124 - 135. ISSN: 0302-9743

Sas, C. and Capiluppi, A. (2020) 'Extracting software modules as communities'. CEUR Workshop Proceedings. ISSN: 1613-0073

Dodo, BI., Li, Y., Dodo, MI. and Liu, X. (2020) 'Simultaneous Segmentation of Retinal OCT Images Using Level Set'. Springer International Publishing. pp. 120 - 136. ISSN: 1865-0929

Shepperd, M., E Abreu, FB., da Silva, AR. and Pérez-Castillo, R. (2020) 'Preface'. ISSN 13: 9783030587925

Dodo, B., Li, Y., Eltayef, K. and Liu, X. (2019) 'Automatic Annotation of Retinal Layers in Optical Coherence Tomography Images'. Journal of Medical Systems, 43 (12). pp. 336. ISSN: 0148-5598 Open Access Link

Sadawi, N., Olier, I., Vanschoren, J., van Rijn, J., Besnard, J., Bickerton, R., Grosan, C., Soldatova, L. and King, R. et al. (2019) 'Multi-task learning with a natural metric for quantitative structure activity relationship learning'. Journal of Cheminformatics, 11 (1). pp. 68. ISSN: 1758-2946 Open Access Link

Li, Y., Salazar-Gonzalez, A., Kaba, D., Wang, C., Eltayef, K. and Dodo, B. (2019) 'Retinal Image Analysis: From Fundus Images to OCT Images'.Retinal Image Analysis. Open Access Link

Dodo, BI., Li, Y., Kaba, D. and Liu, X. (2019) 'Retinal Layer Segmentation in Optical Coherence Tomography Images'. IEEE Access, 7. pp. 152388 - 152398. ISSN: 2169-3536 Open Access Link

Romo, BA., Capiluppi, A. and Ali, A. (2019) 'Locating bug IDs and development logs in open source software (OSS) projects: An experience report'.Innovation and Intelligence for Informatics, Computing, and Technologies (3ICT). Sakhier, Bahrain. 3 - 20 November. IEEE. pp. 1 - 10.Open Access Link

Shepperd, M., Guo, Y., Li, N., Arzoky, M., Capiluppi, A., Counsell, S., Destefanis, G., Swift, S., Tucker, A. and Yousefi, L. et al. (2019) 'The Prevalence of Errors in Machine Learning Experiments'.20th International Conference on Intelligent Data Engineering and Automated Learning (IDEAL). Univ Manchester, Manchester, ENGLAND. 10 - 16 November. Springer International Publishing. pp. 102 - 109. ISSN: 0302-9743 Open Access Link

Balderas, A., Capiluppi, A., Palomo-Duarte, M., Malizia, A. and Dodero, JM. (2019) 'Reducing procrastination while improving performance: A Wiki-powered Experiment with Students'.15th International Symposium on Open Collaboration. Skövde, Sweden. 20 - 22 August. ACM. pp. 1 - 10.Open Access Link

Coutant, A., Roper, K., Trejo-Banos, D., Bouthinon, D., Carpenter, M., Grzebyta, J., Santini, G., Soldano, H., Elati, M., Ramon, J., Rouveirol, C., Soldatova, LN. and King, RD. et al. (2019) 'Closed-loop cycles of experiment design, execution, and learning accelerate systems biology model development in yeast'. Proceedings of the National Academy of Sciences of the United States of America, 116 (36). pp. 18142 - 18147. ISSN: 0027-8424 Open Access Link

Xue, Y., Li, M., Shepperd, M., Lauria, S. and Liu, X. (2019) 'A novel aggregation-based dominance for Pareto-based evolutionary algorithms to configure software product lines'. Neurocomputing, 364. pp. 32 - 48. ISSN: 0925-2312 Open Access Link

Dodo, BI., Li, Y., Tucker, A., Kaba, D. and Liu, X. (2019) 'Retinal OCT segmentation using fuzzy region competition and level set methods'.2019 IEEE 32nd International Symposium on Computer-Based Medical Systems (CBMS). Inst Maimonides Investigac Biomedica Cordoba, Cordoba, SPAIN. 1 - 7 June. IEEE. pp. 93 - 98. ISSN: 1063-7125